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In Mac OS 9 and earlier versions of Mac OS X, Software Update was a standalone tool. The program was part of the CoreServices in OS X. It could automatically inform users of new updates (with new features and bug and security fixes) to the operating system, applications, device drivers, and firmware. All updates required the user to enter their. Copy the Oracle Virtual Desktop Client Mac disk image file, Oracle Virtual Desktop Client.dmg, to the client computer. Double-click the Oracle Virtual Desktop Client.dmg disk image file icon. The Oracle Virtual Desktop Client.mpkg installer file is shown in a Finder window.

3/11/2020New We have some hardware problems and the server is back to normal now...

2/22/2020New Release VisANT 5.53, SVG file is NO long exported to VisANT server, instead it is now saved locally.

2/22/2021New VisANT-Web will come soon! We have built a responsive SPA (Single Page Application) named MIND-Web for our MIND database, VisANT-Web will look similar to MIND-Web, and ideally be integrated together. VisANT users can directly login MIND-Web

1/18/2019 Change VisANT support email address to visant-support AT googlegroups.com

3/31/2017 We are looking for talented postdoc and software engineer to join the NIH-sponsored project, more ...

3/30/2017 VisANT server will undergo regular maintenance on 9am Monday, April 3, 2017. We expect that the maintenance will be finished in one hour.

12/23/2016 Release of VisANT 5.51 to fix some bugs.

04/21/2016 New VisANT publication on PlOS Computational Biology focusing on time-dependent ecosystem-level metabolic networks, more...

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02/26/2016 Release version 5.50, new features including hide/show embedded networks of metanodes and exploratory navigation of these hidden interactions, more...

02/24/2016 Databse maintenance was finished and system is back to normal now.

11/06/2015 Release of VisANT 5.37 with some bug fixing, especially the URL launching problem in Linux/Unix and Mac OS. VisANT 5.37 requires Java 1.6+ to run.

04/22/2015 VisAnt.jar is now signed to make it easier to run as online Applet with the latest JRE and browser. Here is the detailed Instructions for the browser settings in different OS.

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03/26/2015 Release of VisANT 5.20 to modify the behavior of Reaction Node: the exploratory navigation is only available when there is no enzyme embedded in Reaction Node, otherwise, it will behave like normal metanode: double-click will show/hide embedded nodes, more...

03/24/2015 Bug-fixing release of VisANT 5.19, try the SBML sample in Applet or Web Start

03/18/2015 VisANT migration finished, please feel free to let us know if you experience any other problems.

03/17/2015 User manual for the visualization of metabolic network is updated.

03/13/2015 Release of VisANT 5.16 with enhanced edge-list format to support the specification of the node types and bug fixing.

01/02/2015 Release of VisANT 5.0 beta with new functions to support the visual analyses of of metabolic networks in cells and ecosystems

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08/29/2014 Release of VisANT 4.19 with beta release of MBL plugin available under Layout menu that supports the network layout inside the metanodes.

2.2.1. macOS Package Install
2.2.2. Source Install
2.2.3. Git Install
2.2.4. Install Multiple MacPorts Copies

If you are using macOS, you should install MacPorts using the macOS package installer unless you do not wish to install it to /opt/local/, the default MacPorts location, or if you wish to install a pre-release version of MacPorts base. However, if you wish to install multiple copies of MacPorts or install MacPorts on another OS platform, you must install MacPorts from the source code.

The macOS package installer automatically installs MacPorts, sets the shell environment, and runs a selfupdate operation to update the ports tree and MacPorts base with the latest release.

  1. Download the latest MacPorts-2.6.4-....pkg installer from the releases on GitHub. Here are direct links for the latest versions of macOS:

    macOS 10.14 Mojave:
    macOS 10.13 High Sierra:
    macOS 10.12 Sierra:

  2. Double-click the downloaded package installer to perform the default “easy” install.

  3. After this step you are done already, MacPorts is now installed and your shell environment was set up automatically by the installer. To confirm the installation is working as expected, now try using port in a new terminal window.

    In case of problems such as “command not found”, make sure that you opened a new terminal window or consult Section 2.5, “MacPorts and the Shell”. Otherwise, please skip the remainder of this chapter and continue with Chapter 3, Using MacPorts in this guide.

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If you installed MacPorts using the package installer, skip this section. To install MacPorts from the source code, follow the steps below.

  1. Download and extract the MacPorts 2.6.4 tarball. Either do so using your browser and the Finder, or use the given commands in a terminal window.

  2. Afterwards, perform the commands shown in the terminal window. If you wish to use a path other than /opt/local, follow the instructions for installing multiple copies of MacPorts instead.

  3. Please continue with Section 2.5, “MacPorts and the Shell” to set up your shell environment.

If you installed MacPorts using the package installer, skip this section.

There are times when some may want to run MacPorts from a version newer than the current stable release. Maybe there's a new feature that you'd like to use, or it fixes an issue you've encountered, or you just like to be on the cutting edge. These steps explain how to setup MacPorts for developers, using only Git to keep MacPorts up to date.

Though a distinction is made between pre-release and release versions of MacPorts base, the ports collection supports no such distinction or versioning. The selfupdate command installs the latest ports tree, and updates MacPorts base to the latest released version.

  1. Check out MacPorts source

    Pick a location to store a working copy of the MacPorts code. For this example, /opt/mports will be used, but you can put the source anywhere. This example will create /opt/mports/macports-base containing everything needed for MacPorts.

  2. Build and Install MacPorts

    MacPorts uses autoconf and makefiles for installation. These commands will build and install MacPorts to /opt/local. You can add --prefix to ./configure to relocate MacPorts to another directory if needed.

  3. (Optional) Configure MacPorts to use port information from Git

    This step is useful if you want to do port development. Check out the ports tree from git:

    Then open /opt/local/etc/macports/sources.conf in a text editor. The last line should look like this:

    Change it to point to the working copy you checked out:

    Now MacPorts will look for portfiles in the working copy and use Git instead of rsync to update your ports tree.

  4. Environment

    You should setup your PATH and other environment options according to Section 2.5, “MacPorts and the Shell”.

Occasionally a MacPorts developer may wish to install more than one MacPorts instance on the same host. Only one copy of MacPorts may use the default prefix /opt/local, so for additional installations use the option --prefix as shown below. It's also recommended to change the applications dir using --with-applications-dir to avoid conflicts in /Applications/MacPorts. Use --without-startupitems to automatically set startupitem_install no in the new macports.conf, which is required to avoid conflicts in /Library/LaunchAgents or /Library/LaunchDaemons.

Note

The first command temporarily removes the standard MacPorts binary paths because they must not be present while installing a second instance.